PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010025
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 171aa    MW: 19182.5 Da    PI: 10.0352
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-79076PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-203079255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  Aan010025 30 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDKAAIEFRG 79
               59*******.**********94....36************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.63E-242987No hitNo description
PfamPF008473.9E-143079IPR001471AP2/ERF domain
SMARTSM003804.3E-383093IPR001471AP2/ERF domain
PROSITE profilePS5103225.2113087IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-323087IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-223088IPR016177DNA-binding domain
PRINTSPR003673.7E-123142IPR001471AP2/ERF domain
PRINTSPR003673.7E-125369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
XCLGCKLFSD DMNLNYNGGV GGPIKKKKKN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF  60
ETAEAAARAY DKAAIEFRGP RAKLNFAFSD YATSTLPENS QPVVVAPTNS RRSTNRKVNT  120
KVVKETKPIV ENDFLGTIGE GDIQEWMMMM MDFKFNDDSS DSTFSGNVHS V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A9e-242786262ATERF1
2gcc_A9e-242786262ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015085937.16e-47PREDICTED: ethylene-responsive transcription factor ERF109
TrEMBLA0A118K1361e-63A0A118K136_CYNCS; AP2/ERF domain-containing protein
STRINGSolyc01g108240.2.13e-46(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-24redox responsive transcription factor 1